Research workbench
AlphaFold monomer V2.0 prediction for ubiquitin thioesterase ZRANB1 (Q9UGI0)
Analyse AlphaFold monomer V2.0 prediction for ubiquitin thioesterase ZRANB1 (Q9UGI0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9UGI0
- Type
- protein
- Length
- 708 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x03eE9dF280950A2b9f9DE96506c6093Adc158ac7
- Molecule
- Ubiquitin thioesterase ZRANB1
- UniProt
- Q9UGI0
- Pockets
- 10 · best druggability 0.61
Structure
1 distinct chain · 31% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin thioesterase ZRANB1 | protein | 708 | 31% helix, 11% strand | Q9UGI0 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 282 | 0.61 | 0.79 | 38 | empty |
| 2 | 220 | 0.53 | 0.77 | 31 | empty |
| 3 | 153 | 0.52 | 0.79 | 22 | empty |
| 4 | 76 | 0.50 | 0.84 | 16 | empty |
| 5 | 288 | 0.49 | 0.73 | 20 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 3ZRH · Crystal structure of the LYS29, LYS33-linkage-specific trabid otu deubiquitinase domain… · an experimental structure of the same protein · chain A against A, TM-score 0.60
- 3ZRH · Crystal structure of the Lys29, Lys33-linkage-specific TRABID OTU deubiquitinase domain… · an experimental structure of the same protein · chain A against A, TM-score 0.60
- 5AF6 · Structure of Lys33-linked diUb bound to Trabid NZF1 · an experimental structure of the same protein · chain A against G, TM-score 0.04
- 5AF6 · Structure of LYS33-linked diub bound to trabid NZF1 · an experimental structure of the same protein · chain A against G, TM-score 0.04
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UGI0
- Elsewhere: UniProt Q9UGI0 · AlphaFold DB Q9UGI0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.