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AlphaFold monomer V2.0 prediction for zona pellucida-like domain- containing protein 1 (Q8BGZ8)
Analyse AlphaFold monomer V2.0 prediction for zona pellucida-like domain- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8BGZ8
- Type
- protein
- Length
- 415 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x981874BE48BB9B402a2B2B7e233BD910bFf1b4D8
- Molecule
- Zona pellucida-like domain-containing protein 1
- UniProt
- Q8BGZ8
- Pockets
- 3 · best druggability 0.69
Structure
1 distinct chain · 18% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Zona pellucida-like domain-containing protein 1 | protein | 415 | 18% helix, 35% strand | Q8BGZ8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 836 | 0.69 | 0.75 | 83 | empty |
| 2 | 112 | 0.36 | 0.74 | 19 | empty |
| 3 | 52 | 0.32 | 0.77 | 15 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BGZ8
- Elsewhere: UniProt Q8BGZ8 · AlphaFold DB Q8BGZ8
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