Research workbench
AlphaFold monomer V2.0 prediction for zona pellucida sperm-binding protein 2 (P48829)
Analyse AlphaFold monomer V2.0 prediction for zona pellucida sperm-binding protein 2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P48829
- Type
- protein
- Length
- 666 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6f01Aa60d63aDD170B5Eebb00d139334Fc933195
- Molecule
- Zona pellucida sperm-binding protein 2
- UniProt
- P48829
- Pockets
- 10 · best druggability 0.61
Structure
1 distinct chain · 9% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Zona pellucida sperm-binding protein 2 | protein | 666 | 9% helix, 43% strand | P48829 |
Pockets
10 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 446 | 0.61 | 0.75 | 46 | empty |
| 2 | 71 | 0.45 | 0.82 | 17 | empty |
| 3 | 160 | 0.41 | 0.73 | 20 | empty |
| 4 | 101 | 0.39 | 0.76 | 19 | empty |
| 5 | 72 | 0.39 | 0.79 | 18 | empty |
Modifications
Observed in the structure: 10 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P48829
- Elsewhere: UniProt P48829 · AlphaFold DB P48829
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