Research workbench

AlphaFold monomer V2.0 prediction for zinc finger mym-type protein 5 (Q9UJ78)

Analyse AlphaFold monomer V2.0 prediction for zinc finger mym-type protein 5 (Q9UJ78) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q9UJ78
Type: protein
Length: 669 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x6C7844EE9CCb104C5dBBCcd588586c47744E0fFf
Molecule: Zinc finger mym-type protein 5
UniProt: Q9UJ78
Pockets: 3 · best druggability 0.46

Structure

1 distinct chain · 19% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Zinc finger mym-type protein 5	protein	669	19% helix, 9% strand	Q9UJ78

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	233	0.46	0.73	32	empty
2	68	0.30	0.74	12	empty
3	58	0.29	0.74	12	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

2DAS · Solution structure of TRASH domain of zinc finger MYM-type protein 5 · an experimental structure of the same protein · chain A against A, TM-score 0.06
2DAS · Solution structure of trash domain of zinc finger mym-type protein 5 · an experimental structure of the same protein · chain A against A, TM-score 0.06

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9UJ78
Elsewhere: UniProt Q9UJ78 · AlphaFold DB Q9UJ78

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