Research workbench
AlphaFold monomer V2.0 prediction for zeta-carotene desaturase, CHLOROPLASTIC/CHROMOPLASTIC (Q38893)
Analyse AlphaFold monomer V2.0 prediction for zeta-carotene desaturase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q38893
- Type
- protein
- Length
- 558 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf1D7ab9E8371bb2d94E2103375CE73BEeb9a178F
- Molecule
- Zeta-carotene desaturase, CHLOROPLASTIC/CHROMOPLASTIC
- UniProt
- Q38893
- Pockets
- 4 · best druggability 0.83
Structure
1 distinct chain · 38% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Zeta-carotene desaturase, CHLOROPLASTIC/CHROMOPLASTIC | protein | 558 | 38% helix, 19% strand | Q38893 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 570 | 0.83 | 0.88 | 84 | empty |
| 2 | 202 | 0.44 | 0.73 | 36 | empty |
| 3 | 102 | 0.38 | 0.75 | 22 | empty |
| 4 | 60 | 0.28 | 0.73 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q38893
- Elsewhere: UniProt Q38893 · AlphaFold DB Q38893
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