Research workbench
AlphaFold monomer V2.0 prediction for zinc-alpha-2-glycoprotein (P25311)
Analyse AlphaFold monomer V2.0 prediction for zinc-alpha-2-glycoprotein (P25311) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P25311
- Type
- protein
- Length
- 298 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9e5E98E011361C5888c92e2CDb7652E02Bd5C7Ed
- Molecule
- Zinc-alpha-2-glycoprotein
- UniProt
- P25311
- Pockets
- 2 · best druggability 0.57
Structure
1 distinct chain · 23% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Zinc-alpha-2-glycoprotein | protein | 298 | 23% helix, 39% strand | P25311 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 263 | 0.57 | 0.77 | 22 | empty |
| 2 | 64 | 0.39 | 0.79 | 17 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 1ZAG · Human zinc-alpha-2-glycoprotein · an experimental structure of the same protein · chain A against B, TM-score 0.91
- 1ZAG · Human zinc-alpha-2-glycoprotein · an experimental structure of the same protein · chain A against B, TM-score 0.91
- 3ES6 · Crystal structure of the novel complex formed between Zinc 2-glycoprotein (ZAG) and… · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 3ES6 · Crystal structure of the novel complex formed between zinc 2- glycoprotein (zag) and… · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 1T80 · Zn-alpha-2-glycoprotein; CHO-ZAG PEG 200 · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 1T80 · Zn-alpha-2-glycoprotein; cho-zag peg 200 · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 1T7W · Zn-alpha-2-glycoprotein; cho-zag peg 400 · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 1T7W · Zn-alpha-2-glycoprotein; CHO-ZAG PEG 400 · an experimental structure of the same protein · chain A against A, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25311
- Elsewhere: UniProt P25311 · AlphaFold DB P25311
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