Research workbench
AlphaFold monomer V2.0 prediction for putative 23S rRNA (guanine-N(1)-)-methyltransferase yxjb (P42313)
Analyse AlphaFold monomer V2.0 prediction for putative 23S rRNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P42313
- Type
- protein
- Length
- 282 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB6a282F34B389c8F93d7740Ec39199b618a658B3
- Molecule
- Putative 23S rRNA (guanine-N(1)-)-methyltransferase yxjb
- UniProt
- P42313
- Pockets
- 3 · best druggability 0.67
Structure
1 distinct chain · 34% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative 23S rRNA (guanine-N(1)-)-methyltransferase yxjb | protein | 282 | 34% helix, 31% strand | P42313 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 346 | 0.67 | 0.81 | 40 | empty |
| 2 | 88 | 0.44 | 0.80 | 19 | empty |
| 3 | 67 | 0.37 | 0.78 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P42313
- Elsewhere: UniProt P42313 · AlphaFold DB P42313
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