Research workbench
AlphaFold monomer V2.0 prediction for transcriptional activator protein yukr (O87971)
Analyse AlphaFold monomer V2.0 prediction for transcriptional activator protein yukr… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O87971
- Type
- protein
- Length
- 229 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x94351391A793C927223B6941B5741878B0F79eEF
- Molecule
- Transcriptional activator protein yukr
- UniProt
- O87971
- Pockets
- 4 · best druggability 0.77
Structure
1 distinct chain · 51% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional activator protein yukr | protein | 229 | 51% helix, 13% strand | O87971 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 103 | 0.77 | 0.97 | 21 | empty |
| 2 | 169 | 0.45 | 0.75 | 25 | empty |
| 3 | 92 | 0.37 | 0.75 | 21 | empty |
| 4 | 63 | 0.33 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O87971
- Elsewhere: UniProt O87971 · AlphaFold DB O87971
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