Research workbench
AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (Q6CEW7)
Analyse AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (Q6CEW7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6CEW7
- Type
- protein
- Length
- 511 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
- Molecule
- Ribosome biogenesis protein YTM1
- UniProt
- Q6CEW7
- Pockets
- 7 · best druggability 0.75
Structure
1 distinct chain · 9% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome biogenesis protein YTM1 | protein | 511 | 9% helix, 39% strand | Q6CEW7 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 732 | 0.75 | 0.80 | 69 | empty |
| 2 | 116 | 0.61 | 0.86 | 24 | empty |
| 3 | 228 | 0.53 | 0.77 | 24 | empty |
| 4 | 120 | 0.41 | 0.76 | 27 | empty |
| 5 | 52 | 0.30 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6CEW7
- Elsewhere: UniProt Q6CEW7 · AlphaFold DB Q6CEW7
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