Research workbench
AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (Q9C2I5)
Analyse AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (Q9C2I5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9C2I5
- Type
- protein
- Length
- 487 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- Ribosome biogenesis protein YTM1
- UniProt
- Q9C2I5
- Pockets
- 7 · best druggability 0.81
Structure
1 distinct chain · 9% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome biogenesis protein YTM1 | protein | 487 | 9% helix, 43% strand | Q9C2I5 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 716 | 0.81 | 0.85 | 58 | empty |
| 2 | 245 | 0.60 | 0.80 | 38 | empty |
| 3 | 106 | 0.41 | 0.77 | 17 | empty |
| 4 | 85 | 0.38 | 0.77 | 21 | empty |
| 5 | 69 | 0.33 | 0.75 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9C2I5
- Elsewhere: UniProt Q9C2I5 · AlphaFold DB Q9C2I5
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