Research workbench
AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (Q2UGK1)
Analyse AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (Q2UGK1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2UGK1
- Type
- protein
- Length
- 487 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xFA658c241899DD6080b98c8D8783B12085F2a9A6
- Molecule
- Ribosome biogenesis protein YTM1
- UniProt
- Q2UGK1
- Pockets
- 5 · best druggability 0.80
Structure
1 distinct chain · 11% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome biogenesis protein YTM1 | protein | 487 | 11% helix, 44% strand | Q2UGK1 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 672 | 0.80 | 0.85 | 56 | empty |
| 2 | 211 | 0.64 | 0.84 | 32 | empty |
| 3 | 186 | 0.48 | 0.76 | 28 | empty |
| 4 | 102 | 0.41 | 0.77 | 20 | empty |
| 5 | 51 | 0.28 | 0.75 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2UGK1
- Elsewhere: UniProt Q2UGK1 · AlphaFold DB Q2UGK1
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