Research workbench
AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (A2QI22)
Analyse AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (A2QI22) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A2QI22
- Type
- protein
- Length
- 490 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4C9Ec21E2c4D42D2801b0CfEE695Ec148a47FF90
- Molecule
- Ribosome biogenesis protein YTM1
- UniProt
- A2QI22
- Pockets
- 7 · best druggability 0.81
Structure
1 distinct chain · 10% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome biogenesis protein YTM1 | protein | 490 | 10% helix, 42% strand | A2QI22 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 652 | 0.81 | 0.86 | 59 | empty |
| 2 | 262 | 0.65 | 0.82 | 34 | empty |
| 3 | 304 | 0.53 | 0.75 | 28 | empty |
| 4 | 72 | 0.37 | 0.78 | 17 | empty |
| 5 | 84 | 0.33 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A2QI22
- Elsewhere: UniProt A2QI22 · AlphaFold DB A2QI22
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.