Research workbench
AlphaFold monomer V2.0 prediction for probable metal-nicotianamine transporter YSL5 (Q9LUN2)
Analyse AlphaFold monomer V2.0 prediction for probable metal-nicotianamine transporter… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9LUN2
- Type
- protein
- Length
- 714 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3B7D20F680D3B25d23fCE63dAf63b8309002A8C0
- Molecule
- Probable metal-nicotianamine transporter YSL5
- UniProt
- Q9LUN2
- Pockets
- 8 · best druggability 0.82
Structure
1 distinct chain · 70% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable metal-nicotianamine transporter YSL5 | protein | 714 | 70% helix, 1% strand | Q9LUN2 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1199 | 0.82 | 0.83 | 97 | empty |
| 2 | 767 | 0.71 | 0.77 | 71 | empty |
| 3 | 212 | 0.53 | 0.76 | 26 | empty |
| 4 | 106 | 0.40 | 0.75 | 19 | empty |
| 5 | 50 | 0.39 | 0.81 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LUN2
- Elsewhere: UniProt Q9LUN2 · AlphaFold DB Q9LUN2
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