Research workbench
AlphaFold monomer V2.0 prediction for GTP-binding protein YPT11 (A6ZSH6)
Analyse AlphaFold monomer V2.0 prediction for GTP-binding protein YPT11 (A6ZSH6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6ZSH6
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1549cA1d9C2Be61a42eFaCA21D299D03Be72296F
- Molecule
- GTP-binding protein YPT11
- UniProt
- A6ZSH6
- Pockets
- 6 · best druggability 0.66
Structure
1 distinct chain · 26% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | GTP-binding protein YPT11 | protein | 417 | 26% helix, 13% strand | A6ZSH6 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.66 | 0.96 | 17 | empty |
| 2 | 187 | 0.58 | 0.81 | 26 | empty |
| 3 | 223 | 0.47 | 0.74 | 28 | empty |
| 4 | 57 | 0.38 | 0.80 | 15 | empty |
| 5 | 67 | 0.31 | 0.75 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6ZSH6
- Elsewhere: UniProt A6ZSH6 · AlphaFold DB A6ZSH6
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