Research workbench

AlphaFold monomer V2.0 prediction for aminopeptidase ypdf (P76524)

Analyse AlphaFold monomer V2.0 prediction for aminopeptidase ypdf (P76524) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P76524
Type: protein
Length: 361 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
Molecule: Aminopeptidase ypdf
UniProt: P76524
Pockets: 2 · best druggability 0.50

Structure

1 distinct chain · 35% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Aminopeptidase ypdf	protein	361	35% helix, 24% strand	P76524

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	140	0.50	0.79	26	empty
2	105	0.44	0.79	19	empty

Compared structures

5CNX · Crystal structure of xaa-pro aminopeptidase from escherichia COLI K12 · an experimental structure of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P76524
Elsewhere: UniProt P76524 · AlphaFold DB P76524

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