Research workbench
AlphaFold monomer V2.0 prediction for transposon TY1-PR2 gag polyprotein (P0CX60)
Analyse AlphaFold monomer V2.0 prediction for transposon TY1-PR2 gag polyprotein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0CX60
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8649cEf8155c1DF9207d49fC28929aF3f84CBD40
- Molecule
- Transposon TY1-PR2 gag polyprotein
- UniProt
- P0CX60
- Pockets
- 2 · best druggability 0.59
Structure
1 distinct chain · 32% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transposon TY1-PR2 gag polyprotein | protein | 440 | 32% helix, 0% strand | P0CX60 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 362 | 0.59 | 0.76 | 45 | empty |
| 2 | 58 | 0.30 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CX60
- Elsewhere: UniProt P0CX60 · AlphaFold DB P0CX60
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