Research workbench
AlphaFold monomer V2.0 prediction for uncharacterized membrane protein yndj (O31813)
Analyse AlphaFold monomer V2.0 prediction for uncharacterized membrane protein yndj… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O31813
- Type
- protein
- Length
- 546 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x94AA95F893B4A9504df68b74731983419e54EBc3
- Molecule
- Uncharacterized membrane protein yndj
- UniProt
- O31813
- Pockets
- 7 · best druggability 0.82
Structure
1 distinct chain · 53% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized membrane protein yndj | protein | 546 | 53% helix, 21% strand | O31813 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 494 | 0.82 | 0.88 | 45 | empty |
| 2 | 410 | 0.78 | 0.85 | 48 | empty |
| 3 | 339 | 0.63 | 0.79 | 29 | empty |
| 4 | 178 | 0.46 | 0.75 | 26 | empty |
| 5 | 114 | 0.39 | 0.74 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O31813
- Elsewhere: UniProt O31813 · AlphaFold DB O31813
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