Research workbench
AlphaFold monomer V2.0 prediction for uncharacterized mitochondrial protein YMF13 (P38457)
Analyse AlphaFold monomer V2.0 prediction for uncharacterized mitochondrial protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P38457
- Type
- protein
- Length
- 154 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x701549e55AB6d08ee60f8ebb53da937089ABCc62
- Molecule
- Uncharacterized mitochondrial protein YMF13
- UniProt
- P38457
- Pockets
- 5 · best druggability 0.53
Structure
1 distinct chain · 22% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized mitochondrial protein YMF13 | protein | 154 | 22% helix, 21% strand | P38457 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 141 | 0.53 | 0.80 | 28 | empty |
| 2 | 122 | 0.47 | 0.79 | 21 | empty |
| 3 | 50 | 0.44 | 0.84 | 13 | empty |
| 4 | 89 | 0.33 | 0.74 | 18 | empty |
| 5 | 53 | 0.32 | 0.77 | 12 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38457
- Elsewhere: UniProt P38457 · AlphaFold DB P38457
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.