Research workbench
AlphaFold monomer V2.0 prediction for transposon TY1-LR4 gag polyprotein (P0C2I8)
Analyse AlphaFold monomer V2.0 prediction for transposon TY1-LR4 gag polyprotein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0C2I8
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfe3404c48e7625928d3baDED30F60435478de73c
- Molecule
- Transposon TY1-LR4 gag polyprotein
- UniProt
- P0C2I8
- Pockets
- 2 · best druggability 0.45
Structure
1 distinct chain · 31% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transposon TY1-LR4 gag polyprotein | protein | 440 | 31% helix, 0% strand | P0C2I8 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 157 | 0.45 | 0.75 | 24 | empty |
| 2 | 68 | 0.29 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C2I8
- Elsewhere: UniProt P0C2I8 · AlphaFold DB P0C2I8
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