Research workbench
AlphaFold monomer V2.0 prediction for synaptobrevin homolog YKT6 (Q9CQW1)
Analyse AlphaFold monomer V2.0 prediction for synaptobrevin homolog YKT6 (Q9CQW1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9CQW1
- Type
- protein
- Length
- 198 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Synaptobrevin homolog YKT6
- UniProt
- Q9CQW1
- Pockets
- 2 · best druggability 0.71
Structure
1 distinct chain · 47% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Synaptobrevin homolog YKT6 | protein | 198 | 47% helix, 22% strand | Q9CQW1 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 323 | 0.71 | 0.84 | 24 | empty |
| 2 | 91 | 0.37 | 0.76 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CQW1
- Elsewhere: UniProt Q9CQW1 · AlphaFold DB Q9CQW1
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