Research workbench
AlphaFold monomer V2.0 prediction for synaptobrevin homolog YKT6-a (Q6DDU7)
Analyse AlphaFold monomer V2.0 prediction for synaptobrevin homolog YKT6-a (Q6DDU7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6DDU7
- Type
- protein
- Length
- 198 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdED03e95F08d927Dab208C6936D4158E4a542f89
- Molecule
- Synaptobrevin homolog YKT6-a
- UniProt
- Q6DDU7
- Pockets
- 2 · best druggability 0.72
Structure
1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Synaptobrevin homolog YKT6-a | protein | 198 | 42% helix, 22% strand | Q6DDU7 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 339 | 0.72 | 0.83 | 23 | empty |
| 2 | 83 | 0.36 | 0.76 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6DDU7
- Elsewhere: UniProt Q6DDU7 · AlphaFold DB Q6DDU7
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