Research workbench
AlphaFold monomer V2.0 prediction for putative ATP-dependent DNA helicase yjcd (O31626)
Analyse AlphaFold monomer V2.0 prediction for putative ATP-dependent DNA helicase yjcd… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O31626
- Type
- protein
- Length
- 759 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5dE98e70b9933Af0550a86E7d1628A7E076af841
- Molecule
- Putative ATP-dependent DNA helicase yjcd
- UniProt
- O31626
- Pockets
- 9 · best druggability 0.81
Structure
1 distinct chain · 46% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative ATP-dependent DNA helicase yjcd | protein | 759 | 46% helix, 12% strand | O31626 |
Pockets
9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 851 | 0.81 | 0.83 | 78 | empty |
| 2 | 76 | 0.72 | 0.97 | 20 | empty |
| 3 | 389 | 0.69 | 0.82 | 48 | empty |
| 4 | 268 | 0.55 | 0.76 | 31 | empty |
| 5 | 255 | 0.54 | 0.76 | 29 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O31626
- Elsewhere: UniProt O31626 · AlphaFold DB O31626
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