Research workbench
AlphaFold monomer V2.0 prediction for membrane protein insertase yidc (Q02DE0)
Analyse AlphaFold monomer V2.0 prediction for membrane protein insertase yidc (Q02DE0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q02DE0
- Type
- protein
- Length
- 578 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- Membrane protein insertase yidc
- UniProt
- Q02DE0
- Pockets
- 10 · best druggability 0.72
Structure
1 distinct chain · 38% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Membrane protein insertase yidc | protein | 578 | 38% helix, 26% strand | Q02DE0 |
Pockets
10 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 520 | 0.72 | 0.80 | 44 | empty |
| 2 | 325 | 0.61 | 0.78 | 36 | empty |
| 3 | 109 | 0.49 | 0.81 | 27 | empty |
| 4 | 214 | 0.48 | 0.75 | 25 | empty |
| 5 | 114 | 0.39 | 0.76 | 21 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q02DE0
- Elsewhere: UniProt Q02DE0 · AlphaFold DB Q02DE0
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