Research workbench
AlphaFold monomer V2.0 prediction for membrane protein insertase yidc (B4RDV5)
Analyse AlphaFold monomer V2.0 prediction for membrane protein insertase yidc (B4RDV5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4RDV5
- Type
- protein
- Length
- 598 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaBea2334E0055Ee4315718a06ED8EA4943723724
- Molecule
- Membrane protein insertase yidc
- UniProt
- B4RDV5
- Pockets
- 5 · best druggability 0.71
Structure
1 distinct chain · 42% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Membrane protein insertase yidc | protein | 598 | 42% helix, 25% strand | B4RDV5 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 739 | 0.71 | 0.77 | 62 | empty |
| 2 | 361 | 0.57 | 0.75 | 34 | empty |
| 3 | 115 | 0.52 | 0.82 | 27 | empty |
| 4 | 95 | 0.35 | 0.74 | 23 | empty |
| 5 | 52 | 0.31 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4RDV5
- Elsewhere: UniProt B4RDV5 · AlphaFold DB B4RDV5
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