Research workbench
AlphaFold monomer V2.0 prediction for membrane protein insertase yidc (C1D6H8)
Analyse AlphaFold monomer V2.0 prediction for membrane protein insertase yidc (C1D6H8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C1D6H8
- Type
- protein
- Length
- 550 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB05a6C07895e32B47A59E248baa07d66d77b0e17
- Molecule
- Membrane protein insertase yidc
- UniProt
- C1D6H8
- Pockets
- 7 · best druggability 0.79
Structure
1 distinct chain · 38% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Membrane protein insertase yidc | protein | 550 | 38% helix, 25% strand | C1D6H8 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 938 | 0.79 | 0.81 | 80 | empty |
| 2 | 182 | 0.65 | 0.85 | 27 | empty |
| 3 | 113 | 0.53 | 0.83 | 21 | empty |
| 4 | 90 | 0.36 | 0.75 | 16 | empty |
| 5 | 58 | 0.35 | 0.78 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C1D6H8
- Elsewhere: UniProt C1D6H8 · AlphaFold DB C1D6H8
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