Research workbench
AlphaFold monomer V2.0 prediction for transposon TY3-I gag polyprotein (Q99219)
Analyse AlphaFold monomer V2.0 prediction for transposon TY3-I gag polyprotein (Q99219) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q99219
- Type
- protein
- Length
- 290 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x13E88C248c9e8FD361F590BE0a618ae231254269
- Molecule
- Transposon TY3-I gag polyprotein
- UniProt
- Q99219
- Pockets
- 4 · best druggability 0.49
Structure
1 distinct chain · 46% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transposon TY3-I gag polyprotein | protein | 290 | 46% helix, 1% strand | Q99219 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 167 | 0.49 | 0.77 | 21 | empty |
| 2 | 122 | 0.38 | 0.74 | 25 | empty |
| 3 | 78 | 0.33 | 0.74 | 15 | empty |
| 4 | 68 | 0.32 | 0.76 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q99219
- Elsewhere: UniProt Q99219 · AlphaFold DB Q99219
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