Research workbench
AlphaFold monomer V2.0 prediction for inner membrane amino-acid ABC transporter permease protein yhdy (P45768)
Analyse AlphaFold monomer V2.0 prediction for inner membrane amino-acid ABC transporter… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P45768
- Type
- protein
- Length
- 367 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9e5E98E011361C5888c92e2CDb7652E02Bd5C7Ed
- Molecule
- Inner membrane amino-acid ABC transporter permease protein yhdy
- UniProt
- P45768
- Pockets
- 3 · best druggability 0.67
Structure
1 distinct chain · 75% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Inner membrane amino-acid ABC transporter permease protein yhdy | protein | 367 | 75% helix, 1% strand | P45768 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 712 | 0.67 | 0.75 | 50 | empty |
| 2 | 70 | 0.35 | 0.76 | 13 | empty |
| 3 | 50 | 0.25 | 0.73 | 12 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45768
- Elsewhere: UniProt P45768 · AlphaFold DB P45768
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