Research workbench
AlphaFold monomer V2.0 prediction for uncharacterized protein yhdp (P46474)
Analyse AlphaFold monomer V2.0 prediction for uncharacterized protein yhdp (P46474) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P46474
- Type
- protein
- Length
- 1,266 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3747A3Bf275383104682F5Bbc4465870D1591A41
- Molecule
- Uncharacterized protein yhdp
- UniProt
- P46474
- Pockets
- 13 · best druggability 0.88
Structure
1 distinct chain · 18% helix, 55% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein yhdp | protein | 1266 | 18% helix, 55% strand | P46474 |
Pockets
13 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 830 | 0.88 | 0.89 | 93 | empty |
| 2 | 778 | 0.81 | 0.83 | 61 | empty |
| 3 | 917 | 0.78 | 0.79 | 59 | empty |
| 4 | 969 | 0.76 | 0.78 | 72 | empty |
| 5 | 600 | 0.72 | 0.79 | 52 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P46474
- Elsewhere: UniProt P46474 · AlphaFold DB P46474
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