Research workbench
AlphaFold monomer V2.0 prediction for 3'-5' exoribonuclease yham (C1EKC8)
Analyse AlphaFold monomer V2.0 prediction for 3'-5' exoribonuclease yham (C1EKC8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C1EKC8
- Type
- protein
- Length
- 314 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD7Ea924320b052B91736C1c86B3FD4b725512701
- Molecule
- 3'-5' exoribonuclease yham
- UniProt
- C1EKC8
- Pockets
- 3 · best druggability 0.68
Structure
1 distinct chain · 45% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 3'-5' exoribonuclease yham | protein | 314 | 45% helix, 20% strand | C1EKC8 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 573 | 0.68 | 0.77 | 50 | empty |
| 2 | 258 | 0.55 | 0.77 | 32 | empty |
| 3 | 71 | 0.31 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C1EKC8
- Elsewhere: UniProt C1EKC8 · AlphaFold DB C1EKC8
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