Research workbench
AlphaFold monomer V2.0 prediction for transposon TY1-H gag polyprotein (P0C2I4)
Analyse AlphaFold monomer V2.0 prediction for transposon TY1-H gag polyprotein (P0C2I4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0C2I4
- Type
- protein
- Length
- 478 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Transposon TY1-H gag polyprotein
- UniProt
- P0C2I4
- Pockets
- 4 · best druggability 0.63
Structure
1 distinct chain · 32% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transposon TY1-H gag polyprotein | protein | 478 | 32% helix, 0% strand | P0C2I4 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 535 | 0.63 | 0.75 | 45 | empty |
| 2 | 83 | 0.57 | 0.86 | 19 | empty |
| 3 | 177 | 0.43 | 0.73 | 17 | empty |
| 4 | 57 | 0.33 | 0.77 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C2I4
- Elsewhere: UniProt P0C2I4 · AlphaFold DB P0C2I4
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