Research workbench
AlphaFold monomer V2.0 prediction for PDZ domain-containing protein C1685.05 (O74325)
Analyse AlphaFold monomer V2.0 prediction for PDZ domain-containing protein C1685.05… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O74325
- Type
- protein
- Length
- 997 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x47E832BB26b49F1eEbE3dD4A804024b1195017F7
- Molecule
- PDZ domain-containing protein C1685.05
- UniProt
- O74325
- Pockets
- 14 · best druggability 0.82
Structure
1 distinct chain · 15% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PDZ domain-containing protein C1685.05 | protein | 997 | 15% helix, 36% strand | O74325 |
Pockets
14 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 220 | 0.82 | 0.95 | 42 | empty |
| 2 | 476 | 0.74 | 0.83 | 50 | empty |
| 3 | 305 | 0.67 | 0.82 | 37 | empty |
| 4 | 397 | 0.63 | 0.78 | 46 | empty |
| 5 | 330 | 0.55 | 0.75 | 36 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O74325
- Elsewhere: UniProt O74325 · AlphaFold DB O74325
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