Research workbench
AlphaFold monomer V2.0 prediction for putative oligopeptide transporter YGL114W (P53134)
Analyse AlphaFold monomer V2.0 prediction for putative oligopeptide transporter YGL114W… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P53134
- Type
- protein
- Length
- 725 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x025f3b1a898b05AD2731bE6Ab72687b5920c4A3F
- Molecule
- Putative oligopeptide transporter YGL114W
- UniProt
- P53134
- Pockets
- 10 · best druggability 0.83
Structure
1 distinct chain · 72% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative oligopeptide transporter YGL114W | protein | 725 | 72% helix, 2% strand | P53134 |
Pockets
10 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1125 | 0.83 | 0.84 | 112 | empty |
| 2 | 215 | 0.63 | 0.83 | 32 | empty |
| 3 | 196 | 0.50 | 0.76 | 28 | empty |
| 4 | 128 | 0.46 | 0.78 | 17 | empty |
| 5 | 139 | 0.44 | 0.76 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P53134
- Elsewhere: UniProt P53134 · AlphaFold DB P53134
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