Research workbench
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (B1JNT4)
Analyse AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (B1JNT4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1JNT4
- Type
- protein
- Length
- 330 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x08ad39f825B51ca1919f322E73E81839001eD55C
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- B1JNT4
- Pockets
- 4 · best druggability 0.73
Structure
1 distinct chain · 22% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 330 | 22% helix, 33% strand | B1JNT4 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.73 | 0.99 | 17 | empty |
| 2 | 207 | 0.51 | 0.76 | 24 | empty |
| 3 | 57 | 0.47 | 0.85 | 19 | empty |
| 4 | 111 | 0.37 | 0.74 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1JNT4
- Elsewhere: UniProt B1JNT4 · AlphaFold DB B1JNT4
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