Research workbench
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (A1JPM8)
Analyse AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (A1JPM8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1JPM8
- Type
- protein
- Length
- 330 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x732E4190faECa153323BD0294f89362fA205488a
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- A1JPM8
- Pockets
- 3 · best druggability 0.74
Structure
1 distinct chain · 19% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 330 | 19% helix, 33% strand | A1JPM8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 61 | 0.74 | 0.99 | 17 | empty |
| 2 | 193 | 0.49 | 0.76 | 27 | empty |
| 3 | 68 | 0.31 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1JPM8
- Elsewhere: UniProt A1JPM8 · AlphaFold DB A1JPM8
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