Research workbench
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (B5RE09)
Analyse AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (B5RE09) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5RE09
- Type
- protein
- Length
- 326 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC8F990be9D12510878958f6fe9999bbc366962Ad
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- B5RE09
- Pockets
- 3 · best druggability 0.73
Structure
1 distinct chain · 21% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 326 | 21% helix, 33% strand | B5RE09 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 59 | 0.73 | 0.98 | 16 | empty |
| 2 | 196 | 0.51 | 0.77 | 20 | empty |
| 3 | 105 | 0.37 | 0.74 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5RE09
- Elsewhere: UniProt B5RE09 · AlphaFold DB B5RE09
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