Research workbench
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (C4K7V2)
Analyse AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (C4K7V2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C4K7V2
- Type
- protein
- Length
- 336 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7a1388B6Aad67B04634A32f63b8A6D6005eab86c
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- C4K7V2
- Pockets
- 5 · best druggability 0.72
Structure
1 distinct chain · 21% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 336 | 21% helix, 32% strand | C4K7V2 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.72 | 0.99 | 17 | empty |
| 2 | 75 | 0.46 | 0.82 | 19 | empty |
| 3 | 116 | 0.40 | 0.75 | 17 | empty |
| 4 | 120 | 0.40 | 0.75 | 20 | empty |
| 5 | 75 | 0.30 | 0.73 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C4K7V2
- Elsewhere: UniProt C4K7V2 · AlphaFold DB C4K7V2
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