Research workbench
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (B1LD99)
Analyse AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (B1LD99) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1LD99
- Type
- protein
- Length
- 326 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- B1LD99
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 22% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 326 | 22% helix, 33% strand | B1LD99 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 65 | 0.74 | 0.98 | 18 | empty |
| 2 | 172 | 0.50 | 0.77 | 16 | empty |
| 3 | 58 | 0.35 | 0.78 | 16 | empty |
| 4 | 78 | 0.33 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1LD99
- Elsewhere: UniProt B1LD99 · AlphaFold DB B1LD99
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