Research workbench
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (Q0TDV3)
Analyse AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (Q0TDV3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0TDV3
- Type
- protein
- Length
- 326 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x52E3CDE9815A62B85857BFe668884c9Bb2099566
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- Q0TDV3
- Pockets
- 3 · best druggability 0.73
Structure
1 distinct chain · 21% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 326 | 21% helix, 33% strand | Q0TDV3 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 61 | 0.73 | 0.98 | 18 | empty |
| 2 | 141 | 0.48 | 0.78 | 16 | empty |
| 3 | 82 | 0.34 | 0.74 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0TDV3
- Elsewhere: UniProt Q0TDV3 · AlphaFold DB Q0TDV3
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