Research workbench
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (A1AF88)
Analyse AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (A1AF88) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1AF88
- Type
- protein
- Length
- 326 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0635f7A5069052B3f1C85241E72034107484f5ad
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- A1AF88
- Pockets
- 3 · best druggability 0.74
Structure
1 distinct chain · 22% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 326 | 22% helix, 33% strand | A1AF88 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 61 | 0.74 | 0.99 | 17 | empty |
| 2 | 168 | 0.48 | 0.76 | 23 | empty |
| 3 | 81 | 0.33 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1AF88
- Elsewhere: UniProt A1AF88 · AlphaFold DB A1AF88
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