Research workbench
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (B1XEI5)
Analyse AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (B1XEI5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1XEI5
- Type
- protein
- Length
- 326 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5A0D635542A761478aA3795A1Ad351A25E429808
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- B1XEI5
- Pockets
- 5 · best druggability 0.77
Structure
1 distinct chain · 21% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 326 | 21% helix, 33% strand | B1XEI5 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 81 | 0.77 | 0.99 | 17 | empty |
| 2 | 162 | 0.47 | 0.76 | 22 | empty |
| 3 | 92 | 0.46 | 0.80 | 20 | empty |
| 4 | 58 | 0.34 | 0.77 | 15 | empty |
| 5 | 70 | 0.32 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1XEI5
- Elsewhere: UniProt B1XEI5 · AlphaFold DB B1XEI5
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