Research workbench
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (C5A0H0)
Analyse AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (C5A0H0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5A0H0
- Type
- protein
- Length
- 326 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- C5A0H0
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 22% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 326 | 22% helix, 33% strand | C5A0H0 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.76 | 0.99 | 18 | empty |
| 2 | 157 | 0.46 | 0.76 | 25 | empty |
| 3 | 81 | 0.46 | 0.81 | 21 | empty |
| 4 | 59 | 0.30 | 0.74 | 13 | empty |
| 5 | 58 | 0.29 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5A0H0
- Elsewhere: UniProt C5A0H0 · AlphaFold DB C5A0H0
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