Research workbench
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (P57510)
Analyse AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (P57510) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P57510
- Type
- protein
- Length
- 319 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xAcde31F011Da58757068544bc9B82f37d30d5Bf0
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- P57510
- Pockets
- 3 · best druggability 0.54
Structure
1 distinct chain · 19% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 319 | 19% helix, 36% strand | P57510 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 251 | 0.54 | 0.76 | 24 | empty |
| 2 | 71 | 0.39 | 0.79 | 15 | empty |
| 3 | 71 | 0.32 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P57510
- Elsewhere: UniProt P57510 · AlphaFold DB P57510
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