Research workbench
AlphaFold monomer V2.0 prediction for UPF0053 inner membrane protein ygdq (P67129)
Analyse AlphaFold monomer V2.0 prediction for UPF0053 inner membrane protein ygdq… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P67129
- Type
- protein
- Length
- 237 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
- Molecule
- UPF0053 inner membrane protein ygdq
- UniProt
- P67129
- Pockets
- 2 · best druggability 0.55
Structure
1 distinct chain · 80% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0053 inner membrane protein ygdq | protein | 237 | 80% helix, 4% strand | P67129 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 236 | 0.55 | 0.77 | 36 | empty |
| 2 | 116 | 0.44 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P67129
- Elsewhere: UniProt P67129 · AlphaFold DB P67129
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