Research workbench
AlphaFold monomer V2.0 prediction for inner membrane permease ygbn (Q46892)
Analyse AlphaFold monomer V2.0 prediction for inner membrane permease ygbn (Q46892) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q46892
- Type
- protein
- Length
- 454 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Inner membrane permease ygbn
- UniProt
- Q46892
- Pockets
- 6 · best druggability 0.58
Structure
1 distinct chain · 78% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Inner membrane permease ygbn | protein | 454 | 78% helix, 0% strand | Q46892 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 251 | 0.58 | 0.78 | 24 | empty |
| 2 | 55 | 0.45 | 0.84 | 13 | empty |
| 3 | 122 | 0.43 | 0.76 | 17 | empty |
| 4 | 69 | 0.40 | 0.79 | 11 | empty |
| 5 | 68 | 0.33 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q46892
- Elsewhere: UniProt Q46892 · AlphaFold DB Q46892
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