Research workbench
AlphaFold monomer V2.0 prediction for uncharacterized RNA-binding protein YGR250C (P53316)
Analyse AlphaFold monomer V2.0 prediction for uncharacterized RNA-binding protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P53316
- Type
- protein
- Length
- 781 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Uncharacterized RNA-binding protein YGR250C
- UniProt
- P53316
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 19% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized RNA-binding protein YGR250C | protein | 781 | 19% helix, 16% strand | P53316 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 95 | 0.74 | 0.96 | 29 | empty |
| 2 | 197 | 0.54 | 0.78 | 27 | empty |
| 3 | 92 | 0.37 | 0.75 | 15 | empty |
| 4 | 84 | 0.32 | 0.73 | 15 | empty |
| 5 | 75 | 0.31 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P53316
- Elsewhere: UniProt P53316 · AlphaFold DB P53316
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