Research workbench

AlphaFold monomer V2.0 prediction for uncharacterized protein YGR066C (P53242)

Analyse AlphaFold monomer V2.0 prediction for uncharacterized protein YGR066C (P53242) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P53242
Type: protein
Length: 292 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
Molecule: Uncharacterized protein YGR066C
UniProt: P53242
Pockets: 4 · best druggability 0.52

Structure

1 distinct chain · 16% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein YGR066C	protein	292	16% helix, 24% strand	P53242

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	100	0.52	0.82	20	empty
2	196	0.47	0.75	31	empty
3	136	0.41	0.74	15	empty
4	125	0.40	0.74	21	empty

Compared structures

7QQY · yeast Gid10 bound to Art2 Pro/N-degron · an experimental structure of the same protein · chain A against A, TM-score 0.67
7QQY · Yeast GID10 bound to ART2 PRO/N-degron · an experimental structure of the same protein · chain A against A, TM-score 0.67
7Q51 · Yeast GID10 bound to a PHE/N-peptide · an experimental structure of the same protein · chain A against A, TM-score 0.62
7Q51 · yeast Gid10 bound to a Phe/N-peptide · an experimental structure of the same protein · chain A against A, TM-score 0.62

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P53242
Elsewhere: UniProt P53242 · AlphaFold DB P53242

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