Research workbench
AlphaFold monomer V2.0 prediction for transposon TY2-GR2 gag-pol polyprotein (P0CX64)
Analyse AlphaFold monomer V2.0 prediction for transposon TY2-GR2 gag-pol polyprotein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0CX64
- Type
- protein
- Length
- 1,770 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x84F78d27b9595c910E0E436dbec1b606A330c73d
- Molecule
- Transposon TY2-GR2 gag-pol polyprotein
- UniProt
- P0CX64
- Pockets
- 20 · best druggability 0.76
Structure
1 distinct chain · 27% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transposon TY2-GR2 gag-pol polyprotein | protein | 1770 | 27% helix, 14% strand | P0CX64 |
Pockets
20 pockets found on a 1 Å grid, 13 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 716 | 0.76 | 0.81 | 79 | empty |
| 2 | 437 | 0.69 | 0.80 | 34 | empty |
| 3 | 611 | 0.68 | 0.77 | 59 | empty |
| 4 | 55 | 0.68 | 0.95 | 17 | empty |
| 5 | 579 | 0.66 | 0.77 | 51 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CX64
- Elsewhere: UniProt P0CX64 · AlphaFold DB P0CX64
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