Research workbench
AlphaFold monomer V2.0 prediction for transposon TY1-GR2 gag polyprotein (Q12485)
Analyse AlphaFold monomer V2.0 prediction for transposon TY1-GR2 gag polyprotein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q12485
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Transposon TY1-GR2 gag polyprotein
- UniProt
- Q12485
- Pockets
- 3 · best druggability 0.48
Structure
1 distinct chain · 31% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transposon TY1-GR2 gag polyprotein | protein | 440 | 31% helix, 0% strand | Q12485 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 208 | 0.48 | 0.74 | 25 | empty |
| 2 | 54 | 0.34 | 0.78 | 14 | empty |
| 3 | 71 | 0.28 | 0.72 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q12485
- Elsewhere: UniProt Q12485 · AlphaFold DB Q12485
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