Research workbench
AlphaFold monomer V2.0 prediction for UPF0053 inner membrane protein yfjd (P37908)
Analyse AlphaFold monomer V2.0 prediction for UPF0053 inner membrane protein yfjd… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P37908
- Type
- protein
- Length
- 428 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- UPF0053 inner membrane protein yfjd
- UniProt
- P37908
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 57% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0053 inner membrane protein yfjd | protein | 428 | 57% helix, 15% strand | P37908 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 780 | 0.72 | 0.78 | 62 | empty |
| 2 | 62 | 0.30 | 0.74 | 15 | empty |
| 3 | 53 | 0.30 | 0.75 | 12 | empty |
| 4 | 60 | 0.29 | 0.74 | 8 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37908
- Elsewhere: UniProt P37908 · AlphaFold DB P37908
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