Research workbench
AlphaFold monomer V2.0 prediction for probable autotransporter yfal (P45508)
Analyse AlphaFold monomer V2.0 prediction for probable autotransporter yfal (P45508) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P45508
- Type
- protein
- Length
- 1,250 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x13Ce7B1602F31C98a611319cB5cA24DCD906Ba7F
- Molecule
- Probable autotransporter yfal
- UniProt
- P45508
- Pockets
- 8 · best druggability 0.85
Structure
1 distinct chain · 5% helix, 51% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable autotransporter yfal | protein | 1250 | 5% helix, 51% strand | P45508 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 262 | 0.85 | 0.97 | 53 | empty |
| 2 | 177 | 0.65 | 0.86 | 28 | empty |
| 3 | 129 | 0.53 | 0.80 | 17 | empty |
| 4 | 96 | 0.49 | 0.81 | 19 | empty |
| 5 | 120 | 0.42 | 0.76 | 24 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45508
- Elsewhere: UniProt P45508 · AlphaFold DB P45508
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